rs226035511 SNP Detail

Summary

• ID
  rs226035511
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:103225115 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGAGTTCAA AAAAAAAAAA
  AAAAAAAAGA GTTCTATTCC CTGGAGCTGG AGTTATAGGA GGCTGTATCC TGTCCAGTAT
  GGGTGTGAGA ATCAAACTTA GATCTCTTAA GTGCTCTTAA CTGCTAAGCC ATCTCTCCGG
  CCCTAAATGA ATGGATTTTT AAACTGTATA CTTGCTTCCT AGGTCAAGCA ACATTTTAAT
  W
  TAATCAAGTA ACATTGATTT ATTACATAGC CGTTTCTCAT TTTTTTTATG CATTTCAGAG
  TTTTGGGGAA ATCAGAACAT GTGTCTCCTC AAATACTTAG CATGTGTATC ATTAACTAGA
  ATCCAGTATT TGTTTACTTT TCTCTTAGAA GAGCTGTTGT ACAGTGAAAT TTGTAGATAA
  CAGTTCCATC ATGTGAGTCA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323160939	CHEV_9_103250246	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs226035511					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:103225115 () rs orientation: forward

Symbol	Name	Function Class
Rr202394	regulatory region 202394	1029 bp proximal
Rr207098	regulatory region 207098	within coordinates
Topbp1	topoisomerase (DNA) II binding protein 1	within coordinates
Tssr91191	transcription start site region 91191	192 bp upstream