rs226078085 SNP Detail

Summary

• ID
  rs226078085
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:90652763 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGAGAGTGC CAGTGTAGGG
  CTTCCAGGAG CTGTGGCTAG AGGTACGTTG CCATGACCAG CATCTAACCT ATTCTTTTGA
  GGAAGGGCTT CTCCTTGAAT GTGAGGCTCA CATTTTCTCT GCTTGCCCTA TCAAATGTCA
  TCTCTCTACC CTTTGCTGGT CTGGAATTAC AGGTGTGTAC AGAATATCTG GTTTGTTGCC
  R
  GTCCTGGGAT CTGAACTCTG GTCCTTATGA TCTCAAAGCA AGCACTCAAC AGCAAAGCCA
  TCTCTCTATT CCATCCTTGA ACTTCTGACC CTCCTGCCTC TTCTGCTGGG ATTATAGGCA
  TGTATCACCA AGCAGGGTTT ATCTGATGCT AGAGATTGAG TTTAGGCCTC ATGCATGCTA
  GGCAAAGGAC ACCTACTCAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320391270	CHEV_2_90662576	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs226078085					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:90652763 () rs orientation: forward

Symbol	Name	Function Class
Agbl2	ATP/GTP binding protein-like 2	within coordinates
Rr373531	regulatory region 373531	203 bp upstream