rs226079366 SNP Detail

Summary

• ID
  rs226079366
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:77919306 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AGGTGAAGG CTGGCACATC TGACCACTCA
  CTATTGTGCT TCAGTATGGT CAAAGTGGTC CAGCCCTGAT GCTTCCACGG GCCTCCAAGT
  AGTGGGGGTA TTCAGGCTGC AGACAGGTCT GCCAGCTGGA GGCTGCTAAT TGGAATTCTG
  Y
  ACTTTCTAGG GTGGGATGCT AAAGGCCCat ttttttttta atttaaatat attttGTATA
  GGTTTTATGG Atgtggtgtg tgtgtttgag tttcatgggt ggtgtttgtt tgtgtgtgtg
  tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323015014	CHEV_9_77859831	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs226079366					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:77919306 () rs orientation: forward

Symbol	Name	Function Class
Gm23609	predicted gene, 23609	1948 bp downstream
Gm69108	predicted gene, 69108	within coordinates
Rr683456	regulatory region 683456	899 bp distal