rs226093819 SNP Detail

Summary

• ID
  rs226093819
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:66953673 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCCACTGAT ACACTACCTT
  CCTCTTCACC ACTCTCACCT GTACCTTTCT TCCTGTGTCC CCCTCTCCCC CCCCACCCCC
  CCCACCCCCC GGTCCCACTA ACTGTCCCAG CTCCAGTAAT ACCTCCTGTT TCACTTCGGC
  ATGGCACTTC TGGGAGCTAG AGAGGTTGCT TTCTGTGTAA ACTCGAGGAC TCACATCCCC
  R
  AGTTAACTAG CTGGGTGTCA TGCTTGTAAC TCCAGCTCCC AGGGATCCAG TGCCTCCTTC
  TGGTCTCTCT GCCCAGGCCT AGGTGTGCAG CCTCTGCCCC ATTCCACAGG CATACAGTCT
  GACAGACATA AGCACACGCA TGCATCAGGA CATTCGTAAA AACAAACAGT GAAACTCTCT
  ACTTGTTTGC CGCGTTTGCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323345135	CHEV_10_66580642	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs226093819					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:66953673 () rs orientation: forward

Symbol	Name	Function Class
Gm65987	predicted gene, 65987	1567 bp upstream
Gm67716	predicted gene, 67716	695 bp downstream
Jmjd1c	jumonji domain containing 1C	within coordinates
Rr215833	regulatory region 215833	within coordinates
Tssr93804	transcription start site region 93804	1605 bp upstream