rs226236990 SNP Detail

Summary

• ID
  rs226236990
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:102983994 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAACAAATAA TATCAATATA
  TCAAAAGTGC ATTGTTTAGG ATGATCAAGG CAACCAATAG ACCTCTAGAT AGAATACTGG
  GGGCAGGGAA GAAGACAGCT ATAACCTGCC AAAATCTGGA ATAGGAGACA TATCACTAGA
  CAGTTTATAG AATTAAAAGA TTAATAAGGC AACATTACAA ATAGTCTCTC TCACACACAA
  R
  TTGTGTAGCT TAAGTGGAAA AATTCCTTTA AAGACACTGA CTGTTGGTGA TCCATCAAGA
  AAGAGAACAG AGAACTCAAA AAGTCTAATA TTTACTGAAG AAACTGAATT GGTATTTTTA
  AATCTCCCCA TAAAGAAAAC CAAGAATCAA CGGCTTCATT CAATAATTCC ATCCAACTTA
  AAATTGTTTC ACTAACAAAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323160326	CHEV_9_103009125	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs226236990					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:102983994 () rs orientation: forward

Symbol	Name	Function Class
Gm46128	predicted gene, 46128	within coordinates
Rr401633	regulatory region 401633	1747 bp upstream