rs226239457 SNP Detail

Summary

• ID
  rs226239457
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr15:66813710 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    acaaacaca cacatgaagt caggagggaa
  gtctgggaag agctgaaggg aaagaactca gagtacattt gttcagaaaa cattgtacac
  atgtataaaa ttctcaaTGT GGGAGAGACA AGAAAAATCA TATGAATGGC TTGCTGGCTA
  K
  TAGTCAATAC TTCACAATAA TTCACAGACT TCAGCCTGGG TCACCCCTTG ACTGCATCTC
  ATTTGTACCA CATGCCCATG TGGCTCTGTG CTGAGTGTCA CATGGTTAAC TGCTCCGTGA
  GGACACAGGA CACAGGTCTA CACCACTCAC                                 
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325004060	CHEV_15_66773423	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs226239457					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:66813710 () rs orientation: forward

Symbol	Name	Function Class
Ndrg1	N-myc downstream regulated gene 1	Intron
Rr503612	regulatory region 503612	841 bp distal
Tssr134596	transcription start site region 134596	1632 bp upstream
Tssr134597	transcription start site region 134597	1252 bp downstream