rs226240997 SNP Detail

Summary

• ID
  rs226240997
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:109486814 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACAAAATTAA TGCCATTAAA
  AACAAAACAA AACAACAACA ACAAAAAAAC CCACAGGGTT CTCTTTTACT TTTTAATAAT
  TCTGACTTTC CCAAGCCAAG ATCCTCTGTA AGGAGTCTAT ATAACGACAT TTAGAAGAGA
  ACTCATTCGT TGTATTTAAT AGAGGTGTGT TGGTTGTGTA AGCGGTTTCT TTACTGTTCT
  A
  TGTGTAGTTC TAGTCTAGAA TATAATCTGG CCTTTAAAAG TGTTATTCTG AAATTTCTTT
  TTCTCCTCTG GGCATTTTTA TTTAGTCTAT TTCCCTGCAG AGAAATACAT TTACTTATAG
  AGTCAGAAGA TGCACATTTA ACTCTTTATA ATTTACTCTA TAGTCAGTTT TCTACAATCC
  TTTAGATTAT TTAAAGGAAT                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320870032	CHEV_3_109382416	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs226240997					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:109486814 () rs orientation: forward

Symbol	Name	Function Class
Rr583434	regulatory region 583434	227 bp distal
Vav3	vav 3 oncogene	Intron