rs226286494 SNP Detail

Summary

• ID
  rs226286494
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:99665511 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCAGAGTAG TTAGTTGCTC
  ATGCCTGTAA TCCCAACAAT CAGGAAGAGG AGGGGGGCTT GAGTGAGAGA GAGATCCTAT
  CTGTCTCAGA AACAAAACAA ACAAAAATAA GATACAACAC ATCTAGCTTA GAGCATTCCT
  CCAGGTTTCA GTTAGCAATA TAATATTCAA GAAATGCAAA CCTGGAGGAG TTACCCCCTT
  Y
  GTGGTAGAGT TATCCTGTGT GCATATGAAG GAAGAAAGAT AGAGGCTATA AAACAGTACT
  AAGCGTGCAC AGATAACACA GTGAGACGTA GCAGAGAATC CTCTCATCTG ATCAATGCCA
  GTGTCTATTC ATCCTGAAAT AGCTCTCTTC CCAACGATCC ATCTGAGTAT CTGTGCAGAT
  GAACAGACCC TTTGCAACCA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325081767	CHEV_15_99598061	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs226286494					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:99665511 () rs orientation: forward

Symbol	Name	Function Class
Cers5	ceramide synthase 5	within coordinates
Gm17058	predicted gene 17058	within coordinates