rs226290999 SNP Detail

Summary

• ID
  rs226290999
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:92032876 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCGCAGCCGT GGCATCAGGG AGGGCTCTGC ACAACACAGC
  CAGTGGAGAG TGCTCTCTCT CCCTTGAGGC ACATCCACTA AGGAGGCTTT ATAAGGGAGA
  Y
  TGGATAATAA GAACCAAGAT CCAAGAGAAC CACAAACATC CGAGTAAAAT AGCCGGTGGA
  TTCCTCCCTT TTCTACCCAG TCCAGCAGAT GATAGATCA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322790927	CHEV_8_93830147	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs226290999					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:92032876 () rs orientation: forward

Symbol	Name	Function Class
Gm45428	predicted gene 45428	within coordinates
Rpgrip1l	Rpgrip1-like	within coordinates
Rr382458	regulatory region 382458	901 bp downstream
Rr406224	regulatory region 406224	within coordinates
Rr407238	regulatory region 407238	873 bp distal
Rr667510	regulatory region 667510	1286 bp distal