rs226334352 SNP Detail

Summary

• ID
  rs226334352
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:74271316 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCTCA CTGATCCAAA TACTCCCAGT
  M
  GATCCCTGCT TTGTTCCCCA ACATC                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324434601	CHEV_13_74260645	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs226334352					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:74271316 () rs orientation: forward

Symbol	Name	Function Class
0610040A22Rik	RIKEN cDNA 0610040A22 gene	1200 bp upstream
Cpgi5859	CpG island 5859	1452 bp distal
Gm41003	predicted gene, 41003	within coordinates
Slc9a3	solute carrier family 9 (sodium/hydrogen exchanger), member 3	within coordinates
Tssr120348	transcription start site region 120348	1776 bp downstream
Tssr120349	transcription start site region 120349	1751 bp downstream
Tssr120350	transcription start site region 120350	663 bp downstream