rs226392440 SNP Detail

Summary

• ID
  rs226392440
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:107181724 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    cattcatag aaaacctgag tgctgggatt
  acagtggtac accactatag cccACCAATA CTGTACCTAA GTGAGTCTAT CAGAGTCTAT
  GCAGGAGTCA AGGCAAAGGA AACAGCACCA AGACAGCATG TAATATCTGG AGTTCTGGCC
  M
  GGTACCTCCT TCCACTCCTT AGTGGGATAT GTGGACTTTC ACATTCTCTG TTGCGCCTAC
  CCGCAACTCT CCTTTCTCAG AGCTTGTTTG CAGGAAGGGG AGAAACAAAA GAAACTGAAG
  TTAAAGACTT CATAGTCTTT ATATAAATCT                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320865155	CHEV_3_107077326	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs226392440					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:107181724 () rs orientation: forward

Symbol	Name	Function Class
Rr582951	regulatory region 582951	148 bp distal
Rr582952	regulatory region 582952	364 bp distal
Rr582953	regulatory region 582953	1798 bp proximal