rs226403617 SNP Detail

Summary

• ID
  rs226403617
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:74596135 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCTACAGAGA AACCCTGTCT TGAAAACAAA ACAAAACAAA
  ACAAAAACAA AAAAGGAGGA GGGGGGGAGA AGGAGGAGGA AGAGGAAGAG GAGAGAGAGA
  G
  AGAAGGATGG ATGGAAGTTA GGAAGGAAAG AGAAAGAACG AACGTACGAA CGACCCAGAC
  AGTAAATAGG AAGCAGTGGA AGAGCCTATA ATCCTAGCA                       
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323749419	CHEV_11_74518811	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs226403617					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:74596135 () rs orientation: forward

Symbol	Name	Function Class
D11Mit352	DNA Segment, Chr 11 Massachusetts Institute of Technology 352	1926 bp proximal
Pafah1b1	platelet-activating factor acetylhydrolase, isoform 1b, subunit 1	within coordinates
Rr386282	regulatory region 386282	679 bp upstream
Tssr109134	transcription start site region 109134	308 bp downstream