rs226457392 SNP Detail

Summary

• ID
  rs226457392
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:24174682 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTTGGGGTGG GGTATTTACT
  GGTTCACACA GTAGTTCTTC CTCAGGGGAA AGGCTCCTGG CTTCCCTTCT TAGGGATCCC
  ATGTTGATCC TTTAACCAGT CAGAGGGACA AGTAGACTGA TGAGCCTAGG CCAGTAGCTC
  CTCTCTCTAC TTGGAAGAGG ATGGGTTACT AGGAATGGCA ATGGAAGCAT GGCATCAGTG
  Y
  GGGAGAGCAG GCTGCCCGCA GAGAAGGACG CTGCTGTCCT CATGGAGAGC ATCTCTCGGC
  CATTCTTCTT TCCTTCTGGT CTGTCTGCTG TGGTTGGATC TTGAAAGTTT CAGAGGCATT
  ACCTGGAGGT AGTGGAACCT TGATGGGGTG TGGTCTACTG GAAGCAAGTC TGGTCACTGA
  GCATGCTCTT GAAGGAGTTA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323597981	CHEV_11_24124682	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs226457392					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:24174682 () rs orientation: forward

Symbol	Name	Function Class
D11Mit152	DNA segment, Chr 11, Massachusetts Institute of Technology 152	1591 bp proximal
Gm33440	predicted gene, 33440	within coordinates
Rr385801	regulatory region 385801	34 bp upstream