rs226473035 SNP Detail

Summary

• ID
  rs226473035
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:10990546 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACATATAGA CTGTGAAAGT
  GTCTATGCTT TATTTTTTTA TTAGATATTA TCTTTATATA CATTTCAAAT TTCAAATGCT
  ATCCCGAAAG TTCCCTATAC CCTCCCCCCC TCCCGCCCTG CTCCCCTACC CACCCTCTCC
  CGCTTGTTGG CCCTGGTGTT CCCCTGTACT GGGGCATATA AAGTTTGCAA TACCAAGGGG
  Y
  CTCTCTTGCC AGTGATGGGA ATTAAAATAA ATAATTCTCA GGTAAATTCC AGGTAAAACT
  CAAATGTCAA ATACAGTTTG ATAAAATGGA TAAAATAGTT CATATAACTG AACATTAACT
  AAAGTGTAAC CTATGAAAAT CAAAATCTAT AAGTAAAAGT TGTCTGTTGA CAGAGTGGCA
  AAAGAACCAC TTTCCCTATT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324260879	CHEV_13_10939756	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs226473035					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:10990546 () rs orientation: forward

Symbol	Name	Function Class
Rr270342	regulatory region 270342	1946 bp distal
Rr270346	regulatory region 270346	1455 bp proximal
Rr278201	regulatory region 278201	1530 bp proximal