rs226502690 SNP Detail

Summary

• ID
  rs226502690
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:133979704 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCAAAGCCT TCTGGTTGCA
  GCAGTGAGGG GTGGGCACAG TCAAACTCCC AGCATCCACC TCCACAAGTG GCCCTAGCCC
  TGTGGTGGAC CAGACACAGG ACACCATTTT AACCCATATC GCGTGCGCGC GCGCGTGCCT
  GTGTATGTGT GTGTGTGTGT GTGCGCGCGC GCGTGCGCGC GTGCGTGTGT TGGCGTGCGC
  R
  TGTGAGCACA TGTCCTTTTC TTCTTCTGAC ACAGACTTTA CTCATTTCTG TAGACCTATA
  TCATGAAAAT ATGCCAAGGA AAACAGTCTG GAAGGACACA AAGAAGAGAA ACAAGTTGTT
  GAAATAAATG ATTGGCAAAC AAGGGTATTG ATAAGTGCAC CACAGATTAA TTAAACTCCT
  TCAAAAATTG CAAAAATGGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320512718	CHEV_2_133963520	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs226502690					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:133979704 () rs orientation: forward

Symbol	Name	Function Class
Cpgi12318	CpG island 12318	within coordinates