rs226581125 SNP Detail

Summary

• ID
  rs226581125
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:151339118 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    atcaacctt tataagctaa actaatacag
  agctgtaatc ttaattatgt attaatccat gcctttgacc cagagaaatg catgtgtcag
  aacaatcatt tgctggaaac agcaaataaa ctcaaaacag tcttcaactt ttttttttcc
  R
  attaatttta tttcgtgctt tgcctgcctg catggatgga taccataggc atacctgagg
  gtcagaagag tgtcgggtcc cctggaactg agatgtgaac catcacatgg atgctgaaaa
  ccaaagtcct gtgcaaaacc aagtgttctc                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320056681	CHEV_1_153310497	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs226581125					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:151339118 () rs orientation: forward

Symbol	Name	Function Class
Rr372239	regulatory region 372239	1861 bp downstream
Rr420294	regulatory region 420294	1900 bp distal
Rr420295	regulatory region 420295	501 bp distal
Rr420296	regulatory region 420296	856 bp proximal