rs226581297 SNP Detail

Summary

• ID
  rs226581297
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:56498489 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGAAGCACCA GTTGCTGCAT
  TAGAGGTGCT CAGGAGCCCA TCAGCTCTAA GAAGGCAAAC TGAGTTATTC AGCTCATACT
  GCAATGCTAA CCCTGGTTGA AATGTGCTTG ACTCCTTATC AGTGACTCTG GTGACAGTCT
  GTTTCCCCCT CATGAGACTT GCTAGACCCT CTCTCCTCCC AAGCACCTTA GGATGAAGGC
  R
  GAGCCTCCAT GGAATCTTTC TAGGCAGGTA TGGACTGGTT TTTTTGCTCC TCACCTTCCT
  TCACAGTGAG CAGCAGTCAG CACAAAGTCC TCTCGAATAA GGAAGCCCCC ACATATCGCC
  TCAGGCTGCT GATCCTTGAT CGAAAGTAAG GCCATGTAGG GTCGAGAGTG GGGCTTGACT
  TCATGTCCCC CGATGATCTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324645023	CHEV_14_56879869	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs226581297					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:56498489 () rs orientation: forward

Symbol	Name	Function Class
Gzmb	granzyme B	within coordinates
Tssr128924	transcription start site region 128924	1140 bp downstream
Tssr128925	transcription start site region 128925	1185 bp downstream
Tssr128926	transcription start site region 128926	1201 bp downstream