rs226604882 SNP Detail

Summary

• ID
  rs226604882
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:44775283 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGAGGGATGC TGCTTACTGG
  CTTGTTCCCC AGGGCTTTGT TCAAGCTGCT TTCTTATAGA ACCCAGGACC ACCAGCCCAA
  GGGTGGCTCC ACCCACAATG GGCCCTCCCA CCTCAGTCAC TAATTAAGAA AAGGCCCTAC
  AGCCTGATCT TATGGAGGCA TTTTCCCAGT TGAGTTTCCC TCCTTTCAGA TGATCCTAGC
  Y
  TGTGTCAGGT TGACATAAAA CTATCTAGGA CAAGGGGAGA GAGTGAACTG AGTCACAGCG
  AGTATGAATG TATCCTCTGT TCTCTGGCCT TGGGATTCTT TTTGTTTGTT TGTTTTTTGT
  TTGGGGGGGT GTTTGTTTTT GGAGTTTTGT TTGTTTGTTT TTCGGGACAG GGTTTCTCTG
  TGTAACCCTG GCTGTCCTGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324330185	CHEV_13_44717176	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs226604882					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:44775283 () rs orientation: forward

Symbol	Name	Function Class
Gm40931	predicted gene, 40931	within coordinates
Gm47805	predicted gene, 47805	375 bp upstream
Rr283673	regulatory region 283673	119 bp proximal