rs226636030 SNP Detail

Summary

• ID
  rs226636030
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:86740929 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    aaatagatg atagatagat agatagatag
  atagatagat agatagatat ggatagatat agatagatga tagataaata ggtgatagat
  aactagatag attagataga tagatagata gatagataga tagatagata gatagataga
  Y
  agaCAAAAAG GTAAGTAAAT GAGTCTAATA GCCAGGAAAC ATTAAAGAGA AAAACTTATG
  TGTGATCACA CTCATGCACA CACACATGAA AAGTGGAGAC AGACTAAAAG AAAAGAAGTT
  GTGATTACTT TTCTACATTG CTTATATAGA                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321599007	CHEV_5_87022095	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs226636030					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:86740929 () rs orientation: forward

Symbol	Name	Function Class
Tmprss11f	transmembrane protease, serine 11f	within coordinates
Tssr51538	transcription start site region 51538	1598 bp upstream