rs226653882 SNP Detail

Summary

• ID
  rs226653882
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:185415305 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ACCTTCCCT TTTGTGATGG GCACACATGT
  GCTCACATTC ACACGGGTGA ATGAACATGC ATAGTCGTGc atacacacac acacacacac
  acacacacac acgcacacgc acacgcacat gcacactcgc gcacacacac acacacacac
  R
  cacacacgca cgcacgcaca cacgctctca cacacacaga gcacacacaG AAAGGATGCT
  CTCTTGTAGA GTAACCAGAG TTCTGGCTGA ATCAGTGGAG GATTTAGAAC AAAACTCGTA
  GTTGGCCTAG GACCAGCCAG AGTCAAGCTC                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320178610	CHEV_1_187506987	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs226653882					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:185415305 () rs orientation: forward

Symbol	Name	Function Class
Rr425420	regulatory region 425420	548 bp distal
Rr425421	regulatory region 425421	1000 bp distal
Rr425422	regulatory region 425422	1690 bp proximal
Rr425423	regulatory region 425423	1878 bp proximal