rs226662644 SNP Detail

Summary

• ID
  rs226662644
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:95697769 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCTCACAAA GCTACTTAGT
  AAATGTTTAG ACCACCTGCA GCTTGGCTGT TACTGACTGT GAATGGACAG GACTGGGAAG
  TCTCTGCCCT TCCTCCCCCC CCCTCCCTCC CTCCCTCCCT CCCTCCCTCC CTCCCTCCCT
  CCCTCCCTCC ACTCAGATAC CTCAAATTAA AGTTCAGCAT GTGCATGTGG TCCCAACTAC
  K
  TGGTAGGATG AGGCAGGAGG ATTGCTTAAG GCCAGAAGTT TAGAACCAGT CTACAGACAG
  CAAGTCCTGA TCACAAGAAA ATAGAAAGAA AGCTGAAGGG CGAGGGAGAG GAGATGAGGA
  GGAGGAGGGA GAGGAGGGAG AGGAAGAGGG AAAGGGGGCA GGAAAAGGGA AGGAGGGAGA
  GGAGGGGGAA CGAAGAGGAG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322809541	CHEV_8_97495041	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs226662644					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:95697769 () rs orientation: forward

Symbol	Name	Function Class
Gm10286	predicted gene 10286	1387 bp upstream
Gm30968	predicted gene, 30968	within coordinates
Gm64162	predicted gene, 64162	922 bp downstream
Rr178869	regulatory region 178869	1769 bp distal
Rr191276	regulatory region 191276	170 bp distal