rs226731658 SNP Detail

Summary

• ID
  rs226731658
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:73419945 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCACTCACAA AAAGGGACCT
  ATCATGACTG TCTTCTGAAA GACCCAACAA GCAGCTGAAA GAGTCAGATG CAGATGTTTG
  CACCCATCCA ATGGACAGAA GCAGCTGACC CCTGTTGTTG AATTAGGGAA GGCTGAAAGA
  AGCTGAGGAG AAGGGTAATC CTGTAGGAGG ACCAGCATTC TCAATTAATC TGGACCTCTG
  R
  ACCACCAAGC AGACAGTATA CACCAGCTGA CATGAGGCCC CCCCAACACA CATGCAGTCG
  AGTACTTCTG GGTCTGTATT CATTCAGAAA TGACGCACCT AACTCTCAAG AGACTGGAGG
  TCCCAGGGAA TTTAGAGGTC AGAGAGGTTG AAGGGTGGGG ACATCCACGA GGAGACAGAG
  GGGTAGGGAG GAGGTATGGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324098183	CHEV_12_74474158	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs226731658					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:73419945 () rs orientation: forward

Symbol	Name	Function Class
D830013O20Rik	RIKEN cDNA D830013O20 gene	within coordinates
Rr257323	regulatory region 257323	1456 bp proximal
Rr264129	regulatory region 264129	1446 bp distal
Rr264130	regulatory region 264130	1477 bp proximal