rs226749959 SNP Detail

Summary

• ID
  rs226749959
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:134942672 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCTCAATCTA GCTACCGTTT CATCTCAGGT TGGCAGGGGG
  CTTGTCCTGT GTCTCTTCCA TCTGACACTC AATCATGGTA CAGTCTCACT GGTATACTGT
  K
  AATTCTAGTT CAAAAGGAAA AGAGCAAGTG ACATATCATA CCCAGGCTCT AAAAGTGTTT
  GCACAGACAC ACCATAGGTC CCTTCAGCTG ACATGTGCT                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320515724	CHEV_2_134926488	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs226749959					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:134942672 () rs orientation: forward

Symbol	Name	Function Class
Plcb1	phospholipase C, beta 1	Intron
Rr565720	regulatory region 565720	625 bp proximal
Rr565721	regulatory region 565721	1197 bp proximal