rs226751022 SNP Detail

Summary

• ID
  rs226751022
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:84353499 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCACTGTTTT CTAGTCCTAG
  ACAAAGGAAC ATTGTAACCA AGATGGACTG TTTTACTGTG CAAGCAGAAC ATAAGGCAGA
  AGCTTATTAA AACTGCTGAA AATGTTTTCA TAACTTCAAA CAGACAGCTG TAATTATCTT
  CCCACCAAAG TCCCTGCCAA ACACCATTTT TTTTCTGTCT CTACAAACGT GTTTACTCTA
  C
  AGGCCTTTCA GAAGCAGCAT CAGACAATAC TGGATATTCT GCATCCTCTC TCCCTCCCTT
  CCTCCCTCCC TCCCTCCCTC CCTCCCTCTC TAAATTGCTC TCTTAAGTGT TCTCTTTTTA
  ATTTCTGATC TCCTGAGAGT TGGGCATATC CTATCTCTGA CTCATTCAGT CAAACCCTTC
  TCTGATTCAT CACTTTGTCT                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325260788	CHEV_16_84556856	CHEVERUD	SCREENING_POP	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs226751022					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:84353499 () rs orientation: forward

Symbol	Name	Function Class
Gm32073	predicted gene, 32073	1671 bp upstream
Rr518505	regulatory region 518505	1642 bp proximal
Rr518506	regulatory region 518506	1743 bp proximal
Tssr139145	transcription start site region 139145	538 bp upstream