rs226789711 SNP Detail

Summary

• ID
  rs226789711
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:22445109 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    tttactgag agtccgtgct tataaagagg
  gtaggcccat tcccccccac cccccagccc attcttggtg cctggggcca gcctgtaggc
  gatctacagg gtgtgtctcc ggactgcctc aaggacattt cagcaggaag cagagtcttg
  R
  agaagagcaa atagagccat caaggtcaga aggctctccc ctaggtaatc tccttcttag
  tggcagcaag gtcaaagtcT GGACACTCAG CACTTTCCAA GGAATACCTC GCTTACTGCA
  ACATCTTCCT GAGATAGGCT TTGTTATCCT                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321765648	CHEV_6_22395110	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs226789711					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:22445109 () rs orientation: forward

Symbol	Name	Function Class
Rr379049	regulatory region 379049	within coordinates
Tssr59949	transcription start site region 59949	673 bp upstream