rs226802424 SNP Detail

Summary

• ID
  rs226802424
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:61696782 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ATtctctgc ctctgcctct ctctctctct
  ctctctctct ctctctctct ctccctctct ctctctctct ctctctctcc ctctctctct
  ctctctctct ctctctctct ctctctctct ctctctctct ctctctttct ctctctctct
  Y
  tctttctctc tctctGCTTG CATTTGTGAA CTCATACATT TCTGGTGTGA GGAGTGAGCA
  TATTGTGCAT CCAGGTAACA AACAAAAGAC AAATCTACAT TTTTCCCCAC TAGCAGCTTC
  ATTTCTTAAG ACATATTTTA TTCATTATAA                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322228993	CHEV_7_69191920	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs226802424					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:61696782 () rs orientation: forward

Symbol	Name	Function Class
Gm72932	predicted gene, 72932	within coordinates
Mir344f	microRNA Mir344f	786 bp upstream
Rr647584	regulatory region 647584	285 bp distal
Tssr72743	transcription start site region 72743	784 bp upstream