rs226812263 SNP Detail

Summary

• ID
  rs226812263
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:185869588 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCTCAGAAAT CATGACTAAG CCACATACTT GATTATTATT
  CCTATCCTTC CCAAGAAAAC TTAGTTGAAT GTGATTCTTT AAATTCATTT ATTTGTTTGT
  K
  TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTATGCG CACATGCAAT TTTATCCCAG
  TGCATTGGAG GGTAGTGAAC AACTCACAGG GCTTCATTC                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320182228	CHEV_1_187961270	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs226812263					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:185869588 () rs orientation: forward

Symbol	Name	Function Class
Rr425453	regulatory region 425453	55 bp distal
Rr425454	regulatory region 425454	453 bp proximal
Tssr10623	transcription start site region 10623	548 bp upstream