rs226836102 SNP Detail

Summary

• ID
  rs226836102
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:132886875 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AGCACCTAT TGAACACATC TTATACTAAA
  TAGGAATTTa gcctggtgat gataacccac acctttaatc ccagcacggg ggaggcagag
  acaagccaat cttttgggtt caaggcctgg tctgcagagt aagttccagg acagccaagg
  W
  gacacagaga aacctcatct tgaaaaacaa aCAAACAAAT AAGGACAATG CAGAGCTGAG
  CAAAGCCATA GCCTCCCCAC CAAGATATGG AAGTTGAGAA GAGAGTCAAC ATACAGGCCT
  TAGAGACTAG AAGGAGGAAG GATGTGTTAA                                 
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319978141	CHEV_1_134855714	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs226836102					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:132886875 () rs orientation: forward

Symbol	Name	Function Class
Rr19288	regulatory region 19288	875 bp distal
Tssr8757	transcription start site region 8757	1082 bp downstream