rs226862246 SNP Detail

Summary

• ID
  rs226862246
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:49314635 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTCATAGAA ACTAGTCCCT
  GAAAATTAGA CAAGCTCTGA GCCTCTCAGT GAGGAGCTGC AGAGAGGCCT GCTGAGGCGG
  AGCTGAGGAA GGAGCTGAGA AGCCACGGCC AGGTCCACAG GATTAGAGCA TCAGTCAGGG
  TGCAGGGCGG CGTCTGGATG GATGGGCAGG GGTTTGATTA GGGCTCATCA AGCAGAGGGG
  R
  CCCTGCTGAA CTGAAGTGCT GTGGAGAGCT TGGAGTTCTC AGTCTGTTGC GGCAATCCTA
  TACTGCTCTG TGCTCCTGGC TGGTCAGGTG TGCACCTGCC CGGGACCACA CAGACACACA
  GACACACACA GACACACACA CACACACACA CAGACACACA CAGACACACA CACAGACACA
  CACACACACA GACACACACA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321795973	CHEV_6_49287700	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs226862246					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:49314635 () rs orientation: forward

Symbol	Name	Function Class
Ccdc126	coiled-coil domain containing 126	within coordinates
Rr629883	regulatory region 629883	772 bp proximal
Tssr60889	transcription start site region 60889	987 bp downstream