rs226901904 SNP Detail

Summary

• ID
  rs226901904
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:58779113 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GAGTCTCTG TTCACAGGAC CCAGGCTCCA
  GCTGTGGCTA CCACATAAGG ATTTTGTACA AGAAAAATAA AAGAATTAAG CCTGCTagag
  agagagagag agagagagag agagagagag agagaggaag gaaggaagga aggaaggaag
  R
  aagaaagaaa gaaagaaaga aagaaagaaa gaaagaaaga aagaaagaaa gaaaacctac
  aaccaaagaa aacacatggt tggccttgag gttccagctg catatgtagc agaggatggt
  ctagtcggtc atcaatggga ggagaggccc                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325872826	CHEV_19_58865171	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs226901904					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:58779113 () rs orientation: forward

Symbol	Name	Function Class
Gm17150	predicted gene 17150	106 bp downstream
Gm56672	predicted gene, 56672	650 bp upstream
Spmip5	sperm microtubule inner protein 5	within coordinates