rs226927229 SNP Detail

Summary

• ID
  rs226927229
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:69488653 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACTGGCCTAG GCTACTTTCA TCCTTGCTTC AAAAAGGAGG
  CAGGAGGCTT TTAATTTTTT TTTAGACAGG GTCTGCAGCT CAAGCTGGGG TCAAATTCCC
  W
  TTGAAGATGA TGATGGCCTT GAATGCCTAG AGGTTCCAGT CAGCTTCAAC CTCCTGGAGT
  ACTGGATCAC AGGCGTGTAC CACCACCATA CTCAGTTTT                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323730621	CHEV_11_69411329	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs226927229					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:69488653 () rs orientation: forward

Symbol	Name	Function Class
Atp1b2	ATPase, Na+/K+ transporting, beta 2 polypeptide	1909 bp downstream
Gm72066	predicted gene, 72066	1902 bp upstream
Rr386229	regulatory region 386229	1580 bp upstream
Rr450033	regulatory region 450033	1721 bp proximal
Rr450034	regulatory region 450034	1762 bp proximal