rs226953544 SNP Detail

Summary

• ID
  rs226953544
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:70897173 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGATCCCGGT TGAAAGACTT
  GAAGTTTGTC TATTTTAAGT ATCTATCAGA ATGTAAATTC TGTACTTGTA GAACTCTGAG
  AGAGTTTACC ACCACCTGGG AGCCATTTTC ACCCGACTTC AGTTCATCTA CTGGGAAGGT
  ATGCTATTTG TACTTGTGCT AAGAAAACTA CAGTTCAGAT AAATAACACT TGAGCTTCTC
  Y
  ATCTAGATAG GTAGGTGAAC AAGAAGGCAA TAGATCACAT GATTTGAAAG CAAGTGACAC
  AGCTCCTGAC TTACATTAAG ATGAGGCATG AGTAGGGGAT ATGGGTCAGG GATTTGGGTT
  TCCGGACTGG ACCAAGAGCA GAAACAATGA ACAGAGCAAT GTCAGCTGCC CCATTCCAGC
  CCATGAAGCT TAGCTGGTAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324416648	CHEV_13_70887932	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs226953544					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:70897173 () rs orientation: forward

Symbol	Name	Function Class
Adamts16	ADAM metallopeptidase with thrombospondin type 1 motif 16	within coordinates
Tssr123156	transcription start site region 123156	1028 bp downstream