rs226958290 SNP Detail

Summary

• ID
  rs226958290
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:52740256 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ACTTTATTT TGTTAACTAG CTAGAGTCCA
  TCAACTCACC AGAGGCAAAG GTACTTGATT GTTTGTAACT AATTAATTTT AATTAGACTA
  GACTGATTTC TAAGATCATC TCATGTTTTA TAAAAATTTA AACTTCTggg ctggtaagat
  R
  atttagttgt cgatgtcctt gctgagtttg aaccccatat aaggtgtggt ggcatgttct
  tataatctca ggagcttgag aggtagagac aaccagctct ttggagctcg ctagctgact
  gttctagcct actagaaaag tcaaggggag                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319721167	CHEV_1_52757941	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs226958290					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:52740256 () rs orientation: forward

Symbol	Name	Function Class
Gm29670	predicted gene 29670	1175 bp downstream
Mfsd6	major facilitator superfamily domain containing 6	within coordinates