rs226972586 SNP Detail

Summary

• ID
  rs226972586
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:70847600 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TACTGGATA CAGCTTTGGG GATTTGATAA
  TGGTTAATGT CTGAGTCAGT TATTGACAAA ACAGTTGTGC ATATGCGTCT GGCTTTCAAA
  GCAGACCGAG AAAAAAAAAT TAGAAAAAAA ATCTAAGAAG TACAGATAAA GCAAATACAG
  R
  TTACGAACCA TTATCTTATT CTGTTTAGGT GAATAATAGG ATCATCAACT GACACTACAA
  TGAAAAATTG ATTGGGGAAC TTTTTAAGTG GCAAAATTGA GCTGACTCCT TAGAACTCAA
  AGTTTGGTAG CCACATTATC AAAAGTGGGG                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321816276	CHEV_6_70820610	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs226972586					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:70847600 () rs orientation: forward

Symbol	Name	Function Class
Eif2ak3	eukaryotic translation initiation factor 2 alpha kinase 3	within coordinates
Rr399692	regulatory region 399692	1611 bp upstream