rs226975067 SNP Detail

Summary

• ID
  rs226975067
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:101126665 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGAGTGGACA CAGCAGGGTG
  CAGGCATTCC AGCCACAATG AAGCCAGGGT GAGCTAAGAT AGAAAATAAG ACACACCTAG
  GTGTCTGGGT GTTGCTCTGT AGGAAAGCAC TTACCTAGTC TGCTCAAGCA AGGCACTGAG
  TTCAAACCCC AGTAACACAA GAAGAAAATA AGGAATCAAA GATGTACATC GCTGTAACCC
  Y
  AAAGCTGCTT CTAAGGCAGT GCAGCACCCC AAGTTTTTTC TGTGAAACTG CCCTGCTGTT
  CTCATCTGTC TCTCCACCGT CTCCCTGAAA TCTGTGCCTG GAGACCCGAG TAACATTTAC
  TTGAGAACAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAGC AAAAAGAGTG CTTTCAAAGT
  CAAGCCCCCA AGCGCTTCAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320851478	CHEV_3_101023272	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs226975067					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:101126665 () rs orientation: forward

Symbol	Name	Function Class
Gm65590	predicted gene, 65590	within coordinates
Rr581978	regulatory region 581978	728 bp proximal