rs227007510 SNP Detail

Summary

• ID
  rs227007510
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:59837472 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGGGG GGAAAGATGA TGTTTGGTTG
  Y
  TATGAGGATA GTATCAATGG CTACT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323699681	CHEV_11_59760148	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs227007510					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:59837472 () rs orientation: forward

Symbol	Name	Function Class
Cpgi2971	CpG island 2971	1195 bp proximal
Med9	mediator complex subunit 9	1560 bp upstream
Med9os	mediator complex subunit 9, opposite strand	246 bp downstream
Rr448290	regulatory region 448290	1084 bp proximal
Rr448291	regulatory region 448291	1489 bp proximal
Tssr101871	transcription start site region 101871	1563 bp upstream
Tssr108257	transcription start site region 108257	1433 bp downstream
Tssr108258	transcription start site region 108258	1461 bp downstream
Tssr108259	transcription start site region 108259	1529 bp downstream