rs227035919 SNP Detail

Summary

• ID
  rs227035919
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:132832159 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCTTC TTCTTCTTCT TCTTCTACAC
  Y
  GTAGCTGTCT GCAGACACAC CAGAA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321338624	CHEV_4_132660763	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs227035919					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:132832159 () rs orientation: forward

Symbol	Name	Function Class
Rr85920	regulatory region 85920	442 bp proximal
Rr377219	regulatory region 377219	within coordinates
Tssr39450	transcription start site region 39450	312 bp downstream
Tssr43737	transcription start site region 43737	975 bp upstream