rs227039416 SNP Detail

Summary

• ID
  rs227039416
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:118686807 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    gggtcacag cactggaaag gttgggaacc
  agtgCCATAC AGCATCCTTC TCCCAGAGGA GCTTGACCTT CCTCCCAGTC TTTTATCCTT
  CTTCCCAACA TCACTTGCTT TCCTGCACTT TATGCAATTC ACAGCTAACA TTCTAACGAT
  K
  ATCCGTCAAT CACCCACCTT CGAGACTAAA ATGCAATCCC CAGAGACCCC TTTGCTGTGT
  GCCAGCGTGT GCCCAGGAGG CCAGATAGGA GGAAACAGTG GAGGAGACGG TACAGTGAAG
  TGAGATCTTT CTGGGGAGAG GGAAATGCCA                                 
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323503869	CHEV_10_118287958	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs227039416					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:118686807 () rs orientation: forward

Symbol	Name	Function Class
Gm40776	predicted gene, 40776	1770 bp downstream
Gm67702	predicted gene, 67702	1979 bp downstream
Rr226050	regulatory region 226050	1794 bp proximal