rs227040201 SNP Detail

Summary

• ID
  rs227040201
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:138907009 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TATAACTTT CTTTCTTTTT TTTTTCTTTT
  tgtgtttata gcatttttat tcataatagc cagaaactgg aaacaacatt gcttgaataa
  agattggata aagaaaatat ggtacattta cacaatggaa taTAGCTGTC TTTGCCTACt
  K
  tggggagcgg gtgtggcggc agtcccaaag gcgccagaga ctgcagctaa gtcatatgac
  ttgcacctga cttcctcata taagacacaa acatcttgag tgctgcgcag gtgtaccagg
  atacaggtga atccaatttg gtggagattt                                 
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320001825	CHEV_1_140875848	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs227040201					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:138907009 () rs orientation: forward

Symbol	Name	Function Class
4930596I21Rik	RIKEN cDNA 4930596I21 gene	25 bp downstream
Dennd1b	DENN domain containing 1B	within coordinates
Gm71084	predicted gene, 71084	within coordinates