rs227044758 SNP Detail

Summary

• ID
  rs227044758
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr10:24792988 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAGAT CTTAAGACCC TGAAAGCCAC
  K
  CATGGCCACA CACTCCTATC TCAGC                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323275271	CHEV_10_24636896	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs227044758					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:24792988 () rs orientation: forward

Symbol	Name	Function Class
Arg1	arginase, liver	Intron
Tssr92746	transcription start site region 92746	1453 bp downstream
Tssr92747	transcription start site region 92747	1363 bp downstream
Tssr97085	transcription start site region 97085	1597 bp upstream
Tssr97086	transcription start site region 97086	1535 bp upstream
Tssr97087	transcription start site region 97087	1509 bp upstream
Tssr97088	transcription start site region 97088	1449 bp upstream
Tssr97089	transcription start site region 97089	1434 bp upstream
Tssr97090	transcription start site region 97090	1403 bp upstream
Tssr97091	transcription start site region 97091	1008 bp upstream
Tssr97092	transcription start site region 97092	989 bp upstream
Tssr97093	transcription start site region 97093	962 bp upstream
Tssr97094	transcription start site region 97094	951 bp upstream
Tssr97095	transcription start site region 97095	934 bp upstream
Tssr97096	transcription start site region 97096	649 bp upstream
Tssr97097	transcription start site region 97097	402 bp upstream
Tssr97098	transcription start site region 97098	243 bp upstream
Tssr97099	transcription start site region 97099	857 bp downstream
Tssr97100	transcription start site region 97100	895 bp downstream