rs227049614 SNP Detail

Summary

• ID
  rs227049614
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:27996733 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    gtaagcctc tgagacaatt acttcaggca
  aataaaagtt acttttataT ACTAACACTA TATTAATATA ATACttgaat gagcaccact
  cccatgggct cattatctga atacctggtc cccagctgct ggaagcatgg gagcagcatc
  M
  ggagtgtggc cttgctggag gaagtatgtc acgggttggg tggaaatttg aggtttcaaa
  acactaattc ccagtgcact tgttctatga tccgtgtgtg tgTGTGTGTG TGGGGGGGGG
  GGGGGGAGGG GCATTGGCAT GCTCCCTCCT                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325349541	CHEV_17_27914704	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs227049614					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:27996733 () rs orientation: forward

Symbol	Name	Function Class
Ilrun	inflammation and lipid regulator with UBA-like and NBR1-like domains	within coordinates
Rr340954	regulatory region 340954	533 bp distal
Tssr147065	transcription start site region 147065	178 bp downstream