rs227051273 SNP Detail

Summary

• ID
  rs227051273
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:12112422 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTGTA TCCCATGGTA ACCATGGCAA
  C
  CACGGCATCT GCTGGGGGGA AAGCT                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321043915	CHEV_4_12039569	CHEVERUD	SCREENING_POP	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs227051273					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:12112422 () rs orientation: forward

Symbol	Name	Function Class
Gm11839	predicted gene 11839	1862 bp upstream
Rr376110	regulatory region 376110	838 bp downstream
Rr589052	regulatory region 589052	759 bp proximal
Rr589053	regulatory region 589053	855 bp proximal
Tssr36503	transcription start site region 36503	934 bp upstream
Tssr36504	transcription start site region 36504	1036 bp upstream