rs227065481 SNP Detail

Summary

• ID
  rs227065481
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:122669775 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ttccttccc tcctcctcct cctcctcctc
  ctcctcctcc tcctcctcct ccttcttctt cttctctctc tctctctctc tctctctctc
  tctctctcag acagggtctt tcattgcctt gaaactcaca gattattcaa ggtttgctgg
  Y
  cactgagccc ctagtatctg cttgtctcta cctctccagc actgcagatt acaagACCAG
  CCTTGGTGAA TTTCAGTCAC CCCTGGAACT GTGTAGGTCC AGGCTGAGGA GGGGGTGAAC
  ACCCAGCAGA ATGGCCTGTG ATGGTACAAG                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322846773	CHEV_8_124466936	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs227065481					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:122669775 () rs orientation: forward

Symbol	Name	Function Class
Car5a	carbonic anhydrase 5a, mitochondrial	within coordinates
Rr671979	regulatory region 671979	106 bp proximal
Rr671980	regulatory region 671980	1858 bp proximal
Tssr83252	transcription start site region 83252	1813 bp downstream
Tssr83253	transcription start site region 83253	1850 bp downstream