rs227092741 SNP Detail

Summary

• ID
  rs227092741
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:142012480 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TTAATGCCC ACCAAGTGGC AAAACAACCC
  ATTAGGAAGG GCTCATATAA acacacacac acacacacac acacacacac acacacacac
  acaccacaca caccacacac acacacacac acacacacac acacacacac acacacacac
  R
  caTCTCTGCT GGTAGGGTCG AAATTTCTGT TTGGAAAATG TTAGCTGCTG TTAGATCAGA
  GGCCTGAAAA TTAGGAAGTC AGTCCAACCT ATAGGTGGCC AATGGCCTCT GCCTGCCTGT
  CCTTTAGCCA TAAAAACCAA CCAGCAGGCC                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322471340	CHEV_7_149644648	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs227092741					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:142012480 () rs orientation: forward

Symbol	Name	Function Class
D430042D18Rik	Riken cDNA D430042D18 gene	within coordinates
Rr154798	regulatory region 154798	1080 bp distal
Rr154799	regulatory region 154799	within coordinates
Rr166987	regulatory region 166987	1920 bp proximal
Rr400723	regulatory region 400723	1858 bp upstream