rs227147077 SNP Detail

Summary

• ID
  rs227147077
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:51703150 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CCTGCTATT CATCTCCATC ACTGTGAGGA
  CACAAGCGAC ATGGAAAGCT TATCTGACTC ATGATTTCGT AGGTTTCAGT CTGAGGTCAG
  ATGGCTCTGT TGCTCTCGGG CCGTGGAGCA AGGCATCATG GGGGCAGTGC ATGGCAAAAG
  Y
  CTCTTTCTAT GACTAGAAGA GTCAAGAAAA ATGGAAAGGG CTGAGGTCTA AATACTCCCT
  TTGAGGACAT GTTCCCAGAG ACCCCAGTTT TCTCACCCCT TGGCCGACCA CCCCCCCGTA
  GGGTCATGTG ATGGTACTGA GTcagtcctg                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323669282	CHEV_11_51625825	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs227147077					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:51703150 () rs orientation: forward

Symbol	Name	Function Class
Jade2	jade family PHD finger 2	1132 bp downstream
Rr446700	regulatory region 446700	887 bp distal