rs227150112 SNP Detail

Summary

• ID
  rs227150112
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:103376110 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    agttgggag aaaggttgag ggatccaaag
  ATGGTtttac tatcccactc tcatctttag atagctcaat caaacaacaa aatcaaatca
  aaacaaacaa acaaaacaca aagaaacttc agagtcaaac tatgcttaga ttcagtcaat
  R
  gaccaaacag atatatacag aatattccat ccaacagaag tgggatatac attcttctca
  gcatctcaca gaatcctttc taaaatagat taccttctac gtcacaaaac aatgcttaac
  aatagaaaag tgTGAGGACT GGAGGAAGCC                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320442491	CHEV_2_103385922	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs227150112					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:103376110 () rs orientation: forward

Symbol	Name	Function Class
Gm13996	predicted gene 13996	1494 bp upstream
Gm75314	predicted gene, 75314	within coordinates
Rr561864	regulatory region 561864	1434 bp proximal
Rr561865	regulatory region 561865	1519 bp proximal
Rr561866	regulatory region 561866	1581 bp proximal
Rr561867	regulatory region 561867	1621 bp proximal