rs227179993 SNP Detail

Summary

• ID
  rs227179993
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:118354771 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CATGT CGAATTAAAA GAAAATGGAT
  R
  AAGTAACGAA AAATACCAGC GAGGA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320901479	CHEV_3_118264040	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs227179993					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:118354771 () rs orientation: forward

Symbol	Name	Function Class
Cpgi13752	CpG island 13752	910 bp proximal
Dpyd	dihydropyrimidine dehydrogenase	1007 bp upstream
Rr583905	regulatory region 583905	541 bp proximal
Rr583906	regulatory region 583906	1069 bp proximal
Tssr31414	transcription start site region 31414	1023 bp upstream
Tssr31415	transcription start site region 31415	1040 bp upstream