rs227182577 SNP Detail

Summary

• ID
  rs227182577
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:42266148 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    cagaggggG AGACACTGTA CCTTACTTCC
  GAGTGTGGAG GTGGATTGTC TGGCAGGAAA TCTCAGCCTT TGATTTTATA GTCTCTTAGT
  GAAGAGAAAA ATTCAAGTGT AGATGGATAG AAGGAAGGCC ACAGGGACCT AGTTCTAGAC
  Y
  TCTAAGAAGT GCTGTGGCAT TTGGTGCATG GGAAACCTTT TGTTTGGACT GAGCTACTGT
  GACTATTCTA ATGACAGTGT CCCAGAGCCA ACCCCAAATT TTCCCCCTTT CTCTTCTCTG
  CATCTTCCTG GAACAGCAGA GATGGGTACA                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325811979	CHEV_19_42352199	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs227182577					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:42266148 () rs orientation: forward

Symbol	Name	Function Class
Gm34347	predicted gene, 34347	1941 bp upstream