rs227217895 SNP Detail

Summary

• ID
  rs227217895
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:4691820 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GTCCCTTCT GCCTTCATGT GTGTAACCAC
  TTGAGACCAC CAGGCCCAAC TCTCAGGAGC CTCCTCAAAT AGGTAGGCTC AATGGCGGCC
  TCAGTTCCAG CATGTTAGAT ATCTCAAGGG TACTTCTTAA AACTTCAATG TCagccaggt
  R
  gtggcgcaca cctttaatct tagcacttgg gaggcagagg caggtgaatc tctgggtttg
  aggtcagcct ggtctagagt gagtcccagg acagccaggg ctacacagag accttgtTGG
  GGGTGGGAGA GCAGTGGCAA AAAGTTCACT                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325089585	CHEV_16_4873956	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs227217895					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:4691820 () rs orientation: forward

Symbol	Name	Function Class
Rr510946	regulatory region 510946	1690 bp distal
Rr510947	regulatory region 510947	within coordinates
Tssr139803	transcription start site region 139803	1779 bp downstream
Tssr139804	transcription start site region 139804	1872 bp downstream
Ubald1	UBA-like domain containing 1	822 bp downstream