rs227238143 SNP Detail

Summary

• ID
  rs227238143
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:97114333 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTCCTGAAT CAGTCTTCCA
  AGTGCTGTCA CTCCTGGCAT CTGCTACCAT GCCTGCCTTC TATCAATTTT TAATATTGAA
  CATGGAGCTA CTAAGGGATG ATCCCTGGAA ATCATCTGTG TTTTTGAAAT AATCCTATTC
  ACTTCAACTG AGTGTCAGAA ACCTGGTTTT CCTTGGTTAG TTGGGATTAA TTATTCCAGG
  S
  GAGTATAATT TCATCTCTTT TGCTTGTTCG TTTGAGGAAG CCAGCTGACC ACTGCTATTT
  GTCTCAACCT TCAGCTCAGC CGAACCACAT TAGTCAATAA TAGAAGTATG TGTATGTTCT
  GAGCAACTGA GATCTCCATA CCCATAGAAT TCAAAGTCCT AGAGACAGGA CTTAAAGGTA
  TATTCATGTA TCTCAGAGAC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323117089	CHEV_9_97132699	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs227238143					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:97114333 () rs orientation: forward

Symbol	Name	Function Class
Gm29240	predicted gene 29240	1535 bp downstream
Tssr2982	transcription start site region 2982	1887 bp downstream